If you don't have a special reason to use freetrack, you could give facetracknoir a try.Is is also a free to use.Freetrack is last update in 2008 and Ftnoir is newer(I don't know exactly wich year)
http://facetracknoir.sourceforge.net/information_links/download.htm
http://ftnoirpt.sourceforge.net/
Freetrack has more options, with ftnoir you don't need to change the dpi scaling..
To be honest, I don't use freetrack myself anymore but ftnoir now.
Ftnoir comes with a pointtracker plugin so you can use it like freetrack.